HORDB

ID: hor002718
Uniprot ID: F5XVF1
Protein name: Ci-LF-3
Gene name: ci-lf
Organism: Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis)
Family: NA
Source: Animal
Expression: NA
Disease: NA
Comments: NA
Taxonomy: Ciona (genus), Cionidae (family), Phlebobranchia (order), Ascidiacea (class), Tunicata (subphylum), Chordata (phylum), Deuterostomia, Bilateria, Eumetazoa, Metazoa (kingdom), Opisthokonta, Eukaryota (superkingdom), cellular organisms
GO MF: NA
GO BP: NA
GO CC: NA

Sequence: HNPHLPDLF
Length: 9(142-150)
Propeptide: MKLVKSFSILAAFVVCYFGCIADAVPVDTVEKQLLRREGTGNPENFLDWTNQLNSTDVDEPDEELYDQLLYNILIPMQQKMIAEENGQLDNAEDNPFLAENRNSDEENNDYSPGQAESIQSDKRFQSLFKRYPGFQGLFKRHNPHLPDLFKRYNSMGLFKRSPGMLGLFKRGLLGLFKRSDARLQGLFKRDSATQGSFKRSSEAQALPKRYPNFQGLFKRLSEATEYPEDDSSNDDTKQRGNLHSLFKRDTSAHY
Signal peptide: MKLVKSFSILAAFVVCYFGCIADA
Modification: NA
Glycosylation: NA
Mutagenesis: NA

Function: NA
Mechanism: The sequence shown here is derived from an EMBL/GenBank/DDBJ third party annotation (TPA) entry.
Cross BBB: NA
Target: NA
Target Unid: NA
IC50: NA
EC50: NA
ED50: NA
Kd: NA
Half life: NA

Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)

hor002718_AF2.pdb

hor002718_ESM.pdb

Mass:	123210	Formula:	C51H72N14O13
Absent amino acids:	ACEGIKMQRSTVWY	Common amino acids:	HLP
pI:	6.5	Basic residues:	2
Polar residues:	1	Hydrophobic residues:	3
Hydrophobicity:	-68.89	Boman Index:	-1186
Half-Life / Aliphatic Index:	3.5 hour	Aliphatic Index:	86.67
Instability Index:	4502.22	Extinction Coefficient cystines:	0
Absorbance 280nm:	0

PubMed ID: 21467196
Title: Peptidomic Analysis of the Central Nervous System of the Protochordate, Ciona Intestinalis: Homologs and Prototypes of Vertebrate Peptides and Novel Peptides